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1

The tomato genome sequence provides insights into fleshy fruit evolution

Sato, Shusei, Tabata, Satoshi, Hirakawa, Hideki, Asamizu, Erika, Shirasawa, Kenta, Isobe, Sachiko, Kaneko, Takakazu, Nakamura, Yasukazu, Shibata, Daisuke, Aoki, Koh, Egholm, Michael, Knight, James, Bo

Journal:

Year:

2012

Language:

english

File:

PDF, 2.02 MB

english, 2012

2

QTL analysis for flowering time in carnation (Dianthus caryophyllus L.)

Yagi, Masafumi, Shirasawa, Kenta, Hirakawa, Hideki, Isobe, Sachiko, Matsuno, Junko, Uno, Yuichi, Tanase, Koji, Onozaki, Takashi, Yamaguchi, Hiroyasu

Journal:

Scientia Horticulturae

Year:

2020

File:

PDF, 1.64 MB

2020

3

DNA marker applications to molecular genetics and genomics in tomato

Shirasawa, Kenta, Hirakawa, Hideki

Journal:

Breeding Science

Year:

2013

Language:

english

File:

PDF, 280 KB

english, 2013

4

Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifoliaNakai)

Terakami, Shingo, Nishitani, Chikako, Kunihisa, Miyuki, Shirasawa, Kenta, Sato, Shusei, Tabata, Satoshi, Kurita, Kanako, Kanamori, Hiroyuki, Katayose, Yuichi, Takada, Norio, Saito, Toshihiro, Yamamoto

Journal:

Tree Genetics & Genomes

Year:

2014

Language:

english

File:

PDF, 2.77 MB

english, 2014

5

Identification of the carotenoid modifying gene PALE YELLOW PETAL 1 as an essential factor in xanthophyll esterification and yellow flower pigmentation in tomato ( Solanum lycopersicum )

Ariizumi, Tohru, Kishimoto, Sanae, Kakami, Ryo, Maoka, Takashi, Hirakawa, Hideki, Suzuki, Yutaka, Ozeki, Yuko, Shirasawa, Kenta, Bernillon, Stephane, Okabe, Yoshihiro, Moing, Annick, Asamizu, Erika, R

Journal:

The Plant Journal

Year:

2014

Language:

english

File:

PDF, 901 KB

english, 2014

6

Reduction of Surface Roughness of 4H-SiC by Catalyst-Referred Etching

Okamoto, Takeshi, Sano, Yasuhisa, Hara, Hideyuki, Hatayama, Tomoaki, Arima, Kenta, Yagi, Keita, Murata, Junji, Sadakuni, Shun, Tachibana, K., Shirasawa, Y., Mimura, Hidekazu, Fuyuki, Takashi, Yamauchi

Journal:

Materials Science Forum

Year:

2010

Language:

english

File:

PDF, 762 KB

english, 2010

7

Construction of an SSR and RAD Marker-Based Genetic Linkage Map for Carnation (Dianthus caryophyllusL.)

Yagi, Masafumi, Shirasawa, Kenta, Waki, Takamitsu, Kume, Takashi, Isobe, Sachiko, Tanase, Koji, Yamaguchi, Hiroyasu

Journal:

Plant Molecular Biology Reporter

Year:

2017

Language:

english

File:

PDF, 440 KB

english, 2017

8

Characterization of Egyptian Phytophthora infestans population using simple sequence repeat markers

Arafa, Ramadan A., Soliman, Nour Elden K., Moussa, Olfat M., Kamel, Said M., Shirasawa, Kenta

Journal:

Journal of General Plant Pathology

Year:

2018

Language:

english

File:

PDF, 790 KB

english, 2018

9

Identification of gene for rice (Oryza sativa) seed lipoxygenase-3 involved in the generation of stale flavor and development of SNP markers for lipoxygenase-3 deficiency

Shirasawa, Kenta, Takeuchi, Yoshinobu, Ebitani, Takeshi, Suzuki, Yasuhiro

Journal:

Breeding Science

Year:

2008

Language:

english

File:

PDF, 370 KB

english, 2008

10

The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants

Akagi, Takashi, Shirasawa, Kenta, Nagasaki, Hideki, Hirakawa, Hideki, Tao, Ryutaro, Comai, Luca, Henry, Isabelle M., Springer, Nathan M.

Journal:

Year:

2020

Language:

english

File:

PDF, 13.28 MB

english, 2020

11

Advances of Whole Genome Sequencing in Strawberry with NGS Technologies

Isobe, Sachiko, Shirasawa, Kenta, Hirakawa, Hideki

Journal:

The Horticulture Journal

Year:

2020

File:

PDF, 1.09 MB

2020

12

Correction: The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants

Akagi, Takashi, Shirasawa, Kenta, Nagasaki, Hideki, Hirakawa, Hideki, Tao, Ryutaro, Comai, Luca, Henry, Isabelle M.

Journal:

Year:

2020

File:

PDF, 1.35 MB

2020

13

Rootâknot nematode genetic diversity associated with host compatibility to sweetpotato cultivars

Asamizu, Erika, Shirasawa, Kenta, Hirakawa, Hideki, Iwahori, Hideaki

Journal:

Molecular Plant Pathology

Year:

2020

File:

PDF, 2.02 MB

2020

14

Four genetic loci control compact plant size with yellow pearâshaped fruit in ornamental tomato ( Solanum lycopersicum L.)

Safaei, Meysam, Olfati, JamalâAli, Hamidoghli, Yousef, Rabiei, Babak, Yamamoto, Eiji, Shirasawa, Kenta

Journal:

The Plant Genome

Year:

2020

File:

PDF, 363 KB

2020

15

Transgressive segregation and gene regions controlling thermotolerance of fruit set and pollen germination in Capsicum chinense

Yamazaki, Akira, Shirasawa, Kenta, Hosokawa, Munetaka

Journal:

Year:

2020

File:

PDF, 2.34 MB

2020

16

The number of genes having different alleles between rice cultivars estimated by SNP analysis

Kenta Shirasawa, Hiroaki Maeda, Lisa Monna, Sachie Kishitani, Takeshi Nishio

Journal:

Theoretical and Applied Genetics

Year:

2007

Language:

english

File:

PDF, 365 KB

english, 2007

17

An interspecific linkage map of SSR and intronic polymorphism markers in tomato

Kenta Shirasawa, Erika Asamizu, Hiroyuki Fukuoka, Akio Ohyama, Shusei Sato, Yasukazu Nakamura, Satoshi Tabata, Shigemi Sasamoto, Tsuyuko Wada, Yoshie Kishida, Hisano Tsuruoka, Tsunakazu Fujishiro, Man

Journal:

Theoretical and Applied Genetics

Year:

2010

Language:

english

File:

PDF, 520 KB

english, 2010

18

SSR and EST-SSR-based genetic linkage map of cassava (Manihot esculentaCrantz)

Supajit Sraphet, Athipong Boonchanawiwat, Thanwanit Thanyasiriwat, Opas Boonseng, Satoshi Tabata, Shigemi Sasamoto, Kenta Shirasawa, Sachiko Isobe, David A. Lightfoot, Sithichoke Tangphatsornruang, Ka

Journal:

Theoretical and Applied Genetics

Year:

2011

Language:

english

File:

PDF, 472 KB

english, 2011

19

Sgenotyping andSscreening utilizingSFBgene polymorphism in Japanese plum and sweet cherry by dot-blot analysis

Hiroyasu Kitashiba, Shao Ling Zhang, Jun Wu, Kenta Shirasawa, Takeshi Nishio

Journal:

Molecular Breeding

Year:

2008

Language:

english

File:

PDF, 301 KB

english, 2008

20

Leaf-punch method to prepare a large number of PCR templates from plants for SNP analysis

Sachiko Shiokai, Hiroyasu Kitashiba, Kenta Shirasawa, Kuniaki Nagano, Takeshi Nishio

Journal:

Molecular Breeding

Year:

2009

Language:

english

File:

PDF, 227 KB

english, 2009

21

Improvement of the dot-blot-SNP technique for efficient and cost-effective genotyping

Sachiko Shiokai, Kenta Shirasawa, Yutaka Sato, Takeshi Nishio

Journal:

Molecular Breeding

Year:

2010

Language:

english

File:

PDF, 324 KB

english, 2010

22

Conversion of AFLP markers to sequence-specific markers for closely related lines in rice by use of the rice genome sequence

Kenta Shirasawa, Sachie Kishitani, Takeshi Nishio

Journal:

Molecular Breeding

Year:

2004

Language:

english

File:

PDF, 133 KB

english, 2004

23

Development of gene-based markers and construction of an integrated linkage map in eggplant by usingSolanumorthologous (SOL) gene sets

Fukuoka, Hiroyuki, Miyatake, Koji, Nunome, Tsukasa, Negoro, Satomi, Shirasawa, Kenta, Isobe, Sachiko, Asamizu, Erika, Yamaguchi, Hirotaka, Ohyama, Akio

Journal:

Theoretical and Applied Genetics

Year:

2012

Language:

english

File:

PDF, 1.95 MB

english, 2012

24

Characterization of active miniature inverted-repeat transposable elements in the peanut genome

Kenta Shirasawa, Hideki Hirakawa, Satoshi Tabata, Makoto Hasegawa, Hiroyuki Kiyoshima, Sigeru Suzuki, Sigemi Sasamoto, Akiko Watanabe, Tsunakazu Fujishiro, Sachiko Isobe

Journal:

Theoretical and Applied Genetics

Year:

2012

Language:

english

File:

PDF, 681 KB

english, 2012

25

Large-scale development of expressed sequence tag-derived simple sequence repeat markers and diversity analysis inArachisspp.

Padmalatha Koilkonda, Shusei Sato, Satoshi Tabata, Kenta Shirasawa, Hideki Hirakawa, Hiroe Sakai, Shigemi Sasamoto, Akiko Watanabe, Tsuyuko Wada, Yoshie Kishida, Hisano Tsuruoka, Tsunakazu Fujishiro,

Journal:

Molecular Breeding

Year:

2012

Language:

english

File:

PDF, 425 KB

english, 2012

26

Development ofCapsicumEST–SSR markers for species identification andin silicomapping onto the tomato genome sequence

Kenta Shirasawa, Kohei Ishii, Cholgwang Kim, Tomohiro Ban, Munenori Suzuki, Takashi Ito, Toshiya Muranaka, Megumi Kobayashi, Noriko Nagata, Sachiko Isobe, Satoshi Tabata

Journal:

Molecular Breeding

Year:

2013

Language:

english

File:

PDF, 369 KB

english, 2013

27

In silicopolymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut

Shirasawa, Kenta, Koilkonda, Padmalatha, Aoki, Koh, Hirakawa, Hideki, Tabata, Satoshi, Watanabe, Manabu, Hasegawa, Makoto, Kiyoshima, Hiroyuki, Suzuki, Shigeru, Kuwata, Chikara, Naito, Yoshiki, Kuboya

Journal:

BMC Plant Biology

Year:

2012

Language:

english

File:

PDF, 910 KB

english, 2012

28

Identification of the chromosomal region responsible for high-temperature stress tolerance during the grain-filling period in rice

Shirasawa, Kenta, Sekii, Takuma, Ogihara, Yoshinori, Yamada, Teppei, Shirasawa, Sachiko, Kishitani, Sachie, Sasaki, Kunihiko, Nishimura, Minoru, Nagano, Kuniaki, Nishio, Takeshi

Journal:

Molecular Breeding

Year:

2013

Language:

english

File:

PDF, 317 KB

english, 2013

29

Analysis of a tomato introgression line, IL8-3, with increased Brix content

Ikeda, Hiroki, Hiraga, Masahiro, Shirasawa, Kenta, Nishiyama, Manabu, Kanahama, Koki, Kanayama, Yoshinori

Journal:

Scientia Horticulturae

Year:

2013

Language:

english

File:

PDF, 432 KB

english, 2013

30

Development of NILs from heterogeneous inbred families for validating the rust resistance QTL in peanut ( Arachis hypogaea L.)

Yeri, Sharanabasappa B., Shirasawa, Kenta, Pandey, Manish K., Gowda, M. V. C., Sujay, Vanhi, Shriswathi, Manda, Nadaf, Hajisaheb L., Motagi, Babu N., Lingaraju, S., Bhat, A. R. S., Varshney, Rajeev K.

Journal:

Year:

2014

Language:

english

File:

PDF, 369 KB

english, 2014

31

Marker-assisted breeding of a LOX-3-null rice line with improved storability and resistance to preharvest sprouting

Suzuki, Yasuhiro, Miura, Kiyoyuki, Shigemune, Akiko, Sasahara, Hideki, Ohta, Hisatoshi, Uehara, Yasuki, Ishikawa, Tetsuya, Hamada, Shigeki, Shirasawa, Kenta

Journal:

Theoretical and Applied Genetics

Year:

2015

Language:

english

File:

PDF, 985 KB

english, 2015

32

Structural analyses of the tomato genome

Sato, Shusei, Shirasawa, Kenta, Tabata, Satoshi

Journal:

Plant Biotechnology

Year:

2013

Language:

english

File:

PDF, 315 KB

english, 2013

33

Genome-wide survey of artificial mutations induced by ethyl methanesulfonate and gamma rays in tomato

Shirasawa, Kenta, Hirakawa, Hideki, Nunome, Tsukasa, Tabata, Satoshi, Isobe, Sachiko

Journal:

Plant Biotechnology Journal

Year:

2015

Language:

english

File:

PDF, 473 KB

english, 2015

34

Mapping of Micro-Tom BAC-End Sequences to the Reference Tomato Genome Reveals Possible Genome Rearrangements and Polymorphisms

Asamizu, Erika, Shirasawa, Kenta, Hirakawa, Hideki, Sato, Shusei, Tabata, Satoshi, Yano, Kentaro, Ariizumi, Tohru, Shibata, Daisuke, Ezura, Hiroshi

Journal:

International Journal of Plant Genomics

Year:

2012

Language:

english

File:

PDF, 352 KB

english, 2012

35

Availability of Micro-Tom mutant library combined with TILLING in molecular breeding of tomato fruit shelf-life

Okabe, Yoshihiro, Asamizu, Erika, Ariizumi, Tohru, Shirasawa, Kenta, Tabata, Satoshi, Ezura, Hiroshi

Journal:

Breeding Science

Year:

2012

Language:

english

File:

PDF, 6.61 MB

english, 2012

36

Identification of a Seed Phospholipase D Null Allele in Rice ( L.) and Development of SNP Markers for Phospholipase D Deficiency

Suzuki, Yasuhiro, Takeuchi, Yoshinobu, Shirasawa, Kenta

Journal:

Year:

2011

Language:

english

File:

PDF, 4.73 MB

english, 2011

37

Development of EST-SSR markers and construction of a linkage map in faba bean (Vicia faba)

El-Rodeny, Walid, Kimura, Mitsuhiro, Hirakawa, Hideki, Sabah, Attia, Shirasawa, Kenta, Sato, Shusei, Tabata, Satoshi, Sasamoto, Shigemi, Watanabe, Akiko, Kawashima, Kumiko, Kato, Midori, Wada, Tsuyuko

Journal:

Breeding Science

Year:

2014

Language:

english

File:

PDF, 8.24 MB

english, 2014

38

Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants

Shirasawa, Kenta, Isobe, Sachiko, Tabata, Satoshi, Hirakawa, Hideki

Journal:

Breeding Science

Year:

2014

Language:

english

File:

PDF, 5.27 MB

english, 2014

39

Identification of QTLs for Rust Resistance in the Peanut Wild Species Arachis magna and the Development of KASP Markers for Marker-Assisted Selection

Leal-Bertioli, Soraya C. M., Cavalcante, Uiara, Gouvea, Ediene G., Ballén-Taborda, Carolina, Shirasawa, Kenta, Guimarães, Patrícia M., Jackson, Scott A., Bertioli, David J., Moretzsohn, Márcio C.

Journal:

G3 Genes|Genome|Genetics

Year:

2015

Language:

english

File:

PDF, 436 KB

english, 2015

40

Analytical workflow of double-digest restriction site-associated DNA sequencing based on empirical and in silico optimization in tomato

Shirasawa, Kenta, Hirakawa, Hideki, Isobe, Sachiko

Journal:

Year:

2016

Language:

english

File:

PDF, 610 KB

english, 2016

41

QTL mapping for late leaf spot and rust resistance using an improved genetic map and extensive phenotypic data on a recombinant inbred line population in peanut (Arachis hypogaeaL.)

Kolekar, R. M., Sujay, V., Shirasawa, Kenta, Sukruth, M., Khedikar, Y. P., Gowda, M. V. C., Pandey, M. K., Varshney, R. K., Bhat, R. S.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.27 MB

english, 2016

42

Improved Optical and Electrical Characteristics of Free-Standing GaN Substrates by Chemical Polishing Utilizing Photo-Electrochemical Method

Murata, Junji, Shirasawa, Yuki, Sano, Yasuhisa, Sadakuni, Shun, Yagi, Keita, Okamoto, Takeshi, Hattori, Azusa N., Arima, Kenta, Yamauchi, Kazuto

Journal:

Journal of Nanoscience and Nanotechnology

Year:

2011

Language:

english

File:

PDF, 3.00 MB

english, 2011

43

Draft genome sequence of subterranean clover, a reference for genus Trifolium

Hirakawa, Hideki, Kaur, Parwinder, Shirasawa, Kenta, Nichols, Phillip, Nagano, Soichiro, Appels, Rudi, Erskine, William, Isobe, Sachiko N.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.46 MB

english, 2016

44

A simulation-based breeding design that uses whole-genome prediction in tomato

Yamamoto, Eiji, Matsunaga, Hiroshi, Onogi, Akio, Kajiya-Kanegae, Hiromi, Minamikawa, Mai, Suzuki, Akinori, Shirasawa, Kenta, Hirakawa, Hideki, Nunome, Tsukasa, Yamaguchi, Hirotaka, Miyatake, Koji, Ohy

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.27 MB

english, 2016

45

Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.)

Mori, Kazuki, Shirasawa, Kenta, Nogata, Hitoshi, Hirata, Chiharu, Tashiro, Kosuke, Habu, Tsuyoshi, Kim, Sangwan, Himeno, Shuichi, Kuhara, Satoru, Ikegami, Hidetoshi

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.42 MB

english, 2017

46

Target Amplicon Sequencing for Genotyping Genome-Wide Single Nucleotide Polymorphisms Identified by Whole-Genome Resequencing in Peanut

Shirasawa, Kenta, Kuwata, Chikara, Watanabe, Manabu, Fukami, Masanobu, Hirakawa, Hideki, Isobe, Sachiko

Journal:

The Plant Genome

Year:

2016

Language:

english

File:

PDF, 1.78 MB

english, 2016

47

A high-density SNP genetic map consisting of a complete set of homologous groups in autohexaploid sweetpotato (Ipomoea batatas)

Shirasawa, Kenta, Tanaka, Masaru, Takahata, Yasuhiro, Ma, Daifu, Cao, Qinghe, Liu, Qingchang, Zhai, Hong, Kwak, Sang-Soo, Cheol Jeong, Jae, Yoon, Ung-Han, Lee, Hyeong-Un, Hirakawa, Hideki, Isobe, Sach

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.63 MB

english, 2017

48

A System for Distinguishing Octoploid Strawberry Cultivars Using High-Throughput SNP Genotyping

Jung, Hee-Jeong, Veerappan, Karpagam, Natarajan, Sathishkumar, Jeong, Namhee, Hwang, Indeok, Nagano, Soichiro, Shirasawa, Kenta, Isobe, Sachiko, Nou, Ill-Sup

Journal:

Tropical Plant Biology

Year:

2017

Language:

english

File:

PDF, 497 KB

english, 2017

49

Bayesian QTL mapping using genome-wide SSR markers and segregating population derived from a cross of two commercial F1 hybrids of tomato

Ohyama, Akio, Shirasawa, Kenta, Matsunaga, Hiroshi, Negoro, Satomi, Miyatake, Koji, Yamaguchi, Hirotaka, Nunome, Tsukasa, Iwata, Hiroyoshi, Fukuoka, Hiroyuki, Hayashi, Takeshi

Journal:

Theoretical and Applied Genetics

Year:

2017

Language:

english

File:

PDF, 620 KB

english, 2017

50

Discrimination of candidate subgenome-specific loci by linkage map construction with an S1 population of octoploid strawberry (Fragaria × ananassa)

Nagano, Soichiro, Shirasawa, Kenta, Hirakawa, Hideki, Maeda, Fumi, Ishikawa, Masami, Isobe, Sachiko N.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.26 MB

english, 2017

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